Compute probability from samples that person A infects person B

compute_A_infects_B(df)

Arguments

df	data frame with the following columns cluster_id unique ID of cluster prob_trans individual probability of transmission like likelihood of cluster id id of person within cluster inf_id infector ID of person feature_id a unique person/or set of features across the MC clusters

Value

a n x n matrix where n is the number of individuals in the cluster. The rows correspond to the INFECTOR id and the columns to the INFECTED id. So entry i,j is the probability i infects j