R/likelihood-profiling.R
loglike_wrapper.RdWrapper to optimize over a single variable for likelihood profiling
loglike_wrapper( x, max_loglike, best_pars, mc_trees, covariate_names, alpha = 0.05, beta_index = 1, multiple_outside_transmissions = FALSE )
| x | parameter to optimize over |
|---|---|
| max_loglike | maximum loglike value from output |
| best_pars | vector of best parameters |
| mc_trees | output of |
| covariate_names | covariate names to look over |
| alpha | \(\alpha\)-value for computing confidence intervals. |
| beta_index | which parameter to optimize over. |
| multiple_outside_transmissions | whether to use base model or not |
zeros of likelihood profiling for given \(alpha\)
internal function only. This is for the general case