R/likelihood-profiling.R
loglike_wrapper.Rd
Wrapper to optimize over a single variable for likelihood profiling
loglike_wrapper( x, max_loglike, best_pars, mc_trees, covariate_names, alpha = 0.05, beta_index = 1, multiple_outside_transmissions = FALSE )
x | parameter to optimize over |
---|---|
max_loglike | maximum loglike value from output |
best_pars | vector of best parameters |
mc_trees | output of |
covariate_names | covariate names to look over |
alpha | \(\alpha\)-value for computing confidence intervals. |
beta_index | which parameter to optimize over. |
multiple_outside_transmissions | whether to use base model or not |
zeros of likelihood profiling for given \(alpha\)
internal function only. This is for the general case