Articles • EpiCompare

Learning EpiCompare

Vignettes aimed at getting you started and aware of the tools available

Getting started
An Introduction to Ternary Plots
Comparing Models (to Models) and Epidemics (to Models)
Understanding Prediction Bands and Impact of Quantile/Ordering Functions
Using EpiModel models with EpiCompare
Basic simulations with EpiCompare

A longform vignette: Hagelloch measles 1861-1862

A look at the epidemic data analysis pipeline with EpiCompare

Hagelloch Measles -- Pre-processing and EDA
Hagelloch Measles -- Modeling and Simulation
Hagelloch Measles -- Fitting the deterministic, continuous time SIR model
Hagelloch Measles -- Fitting a Stochastic SIR Model
Hagelloch Measles -- Fitting a Stochastic SIR Grouped Model
Hagelloch Measles -- Fitting a Stochastic SIR Model

Data examples

Vignettes that take a dive into different datasets

COVID-19 and EpiCompare

Extended Discussions

Vignettes that provided extended discussions on statistical ideas

Comparing Depth and Density